Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8397 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1208807 bp
Thymine Count
1212996 bp
Guanine Count
1244914 bp
Cytosine Count
1240206 bp
Genome Length
4907049 bp
Protein-coding Genes
4545 genes
Non-Coding Genes
165 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acid-sensing system histidine kinase evgs | E5P19_06385 | Not Available | Positive | 1356277 - 1359870 | 134837.0 |
| acetyl-coa--oxalate coa-transferase | E5P19_06390 | Not Available | Negative | 1359926 - 1361071 | 41673.2 |
| transporter yfdv | E5P19_06395 | Not Available | Negative | 1361145 - 1362089 | 33617.9 |
| oxalyl-coa decarboxylase | E5P19_06400 | Not Available | Negative | 1362159 - 1363853 | 60614.9 |
| formyl-coa--oxalate coa-transferase | E5P19_06405 | Not Available | Negative | 1363907 - 1365157 | 45830.7 |
| yfdx family protein | E5P19_06410 | Not Available | Negative | 1365670 - 1366302 | 22907.4 |
| colanic acid biosynthesis lipoprotein ypdi | E5P19_06415 | Not Available | Positive | 1366598 - 1366873 | 10210.5 |
| duf2545 family protein | E5P19_06420 | Not Available | Negative | 1366950 - 1367192 | 8923.5 |
| kdo(2)-lipid iv(a) palmitoleoyltransferase | E5P19_06425 | Not Available | Positive | 1367545 - 1368465 | 35495.5 |
| membrane protein ypdk | E5P19_06430 | Not Available | Positive | 1368821 - 1368892 | 2704.57 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





