Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8397 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1208807 bp
Thymine Count
1212996 bp
Guanine Count
1244914 bp
Cytosine Count
1240206 bp
Genome Length
4907049 bp
Protein-coding Genes
4545 genes
Non-Coding Genes
165 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system sensor histidine kinase atos | E5P19_06270 | Not Available | Negative | 1329281 - 1331107 | 67837.2 |
| two-component system sensor histidine kinase rcsc | E5P19_06275 | Not Available | Positive | 1331274 - 1334123 | 106499.0 |
| transcriptional regulator rcsb | E5P19_06280 | Not Available | Negative | 1334437 - 1335087 | 23672.0 |
| phosphotransferase rcsd | E5P19_06285 | Not Available | Negative | 1335104 - 1337776 | 100368.0 |
| porin ompc | E5P19_06290 | Not Available | Positive | 1338514 - 1339638 | 41293.3 |
| fad:protein fmn transferase apbe | E5P19_06295 | Not Available | Positive | 1339750 - 1340805 | 38623.1 |
| bifunctional dna-binding transcriptional regulator/o6-methylguanine-dna methyltransferase ada | E5P19_06300 | Not Available | Positive | 1340879 - 1341943 | 39239.8 |
| dna oxidative demethylase alkb | E5P19_06305 | Not Available | Positive | 1341943 - 1342593 | 23999.7 |
| microcin j25 efflux abc transporter yoji | E5P19_06310 | Not Available | Positive | 1342669 - 1344312 | 61576.4 |
| ggdef domain-containing protein | E5P19_06315 | Not Available | Positive | 1344412 - 1344930 | 19685.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





