Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8397 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1208807 bp
Thymine Count
1212996 bp
Guanine Count
1244914 bp
Cytosine Count
1240206 bp
Genome Length
4907049 bp
Protein-coding Genes
4545 genes
Non-Coding Genes
165 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph-dependent aldehyde reductase ahr | E5P19_05555 | Not Available | Negative | 1171547 - 1172566 | 36490.0 |
| Trna-leu | Not Available | Not Available | Positive | 1172762 - 1172846 | Not Available |
| hsdr family type i site-specific deoxyribonuclease | E5P19_05565 | Not Available | Negative | 1173071 - 1176187 | 120179.0 |
| restriction endonuclease subunit s | E5P19_05570 | Not Available | Negative | 1176309 - 1177553 | 47674.2 |
| type i restriction-modification system subunit m | E5P19_05575 | Not Available | Negative | 1177550 - 1179106 | 57789.1 |
| duf4942 domain-containing protein | E5P19_05580 | Not Available | Positive | 1179411 - 1180244 | 32088.4 |
| s-adenosylhomocysteine hydrolase | E5P19_05585 | Not Available | Positive | 1180314 - 1180709 | 14606.8 |
| nucleotidyl transferase abieii/abigii toxin family protein | E5P19_05590 | Not Available | Positive | 1180702 - 1181649 | 35590.8 |
| hypothetical protein | E5P19_05595 | Not Available | Negative | 1181687 - 1181872 | 6997.6 |
| hnh endonuclease | E5P19_05605 | Not Available | Positive | 1182251 - 1182901 | 24196.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





