Escherichia coli strain KCJK8397

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain KCJK8397 is a Gram-negative, rod-shaped bacterium characterized as a facultative anaerobe. It typically exists in pairs or singles and possesses flagella, allowing for mobility. This strain thrives optimally at 37 degrees Celsius and falls within the mesophilic temperature range. E. coli KCJK8397 has a single replicon and is characterized by a double membrane structure. This bacterium is host-associated and demonstrates a free-living biotic relationship. It shows a wide range of potential hosts, including Homo sapiens, various species of livestock such as Bos taurus and Sus scrofa, birds like Gallus gallus and Meleagris gallopavo, as well as several species of mammals, reptiles, plants, and even invertebrates such as Apis mellifera and Acanthamoeba castellanii. E. coli strain KCJK8397 is known to be pathogenic to humans, causing a variety of health issues. These include urinary tract infections (UTIs), gastrointestinal infections, neonatal meningitis, and severe conditions such as hemolytic uremic syndrome (HUS) and septicemia. The strain is also linked to foodborne infections and other diseases affecting both humans and animals. Given its ability to infect a diverse array of hosts and its association with numerous health complications, E. coli strain KCJK8397 serves as an important organism for understanding microbial pathogenicity and host interactions. Its presence in various environments emphasizes the ecological significance of E. coli in both health and disease dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain KCJK8397

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain KCJK8397
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain KCJK8397

Gene Summary

Adenine Count

1208807 bp

Thymine Count

1212996 bp

Guanine Count

1244914 bp

Cytosine Count

1240206 bp

Genome Length

4907049 bp

Protein-coding Genes

4545 genes

Non-Coding Genes

165 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gamma-glutamylcyclotransferaseE5P19_05355Not AvailablePositive1129598 - 112993912867.2
type ii toxin-antitoxin system chps family antitoxinE5P19_05360Not AvailablePositive1130151 - 11304029302.14
endoribonuclease toxin chpbE5P19_05365Not AvailablePositive1130396 - 113074612512.2
inorganic diphosphataseE5P19_05370Not AvailableNegative1130826 - 113135619704.6
galactofuranose abc transporter substrate-binding protein ytfqE5P19_05375Not AvailablePositive1131666 - 113262234328.5
sugar abc transporter atp-binding proteinE5P19_05380Not AvailablePositive1132762 - 113426455243.5
abc transporter permeaseE5P19_05385Not AvailablePositive1134278 - 113530035425.9
sugar abc transporter permease yjffE5P19_05390Not AvailablePositive1135287 - 113628235008.0
class 1 fructose-bisphosphataseE5P19_05395Not AvailableNegative1136315 - 113731336836.0
udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligaseE5P19_05400Not AvailablePositive1137489 - 113886249882.0

Displaying genes 1141 – 1150 of 4710 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total