Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8392 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1219523 bp
Thymine Count
1212492 bp
Guanine Count
1251439 bp
Cytosine Count
1243238 bp
Genome Length
4926717 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
272 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rpoe leader peptide rsed | E5P18_08310 | Not Available | Positive | 1718386 - 1718541 | 6229.83 |
| rna polymerase sigma factor rpoe | E5P18_08315 | Not Available | Positive | 1718538 - 1719113 | 21697.0 |
| anti-sigma-e factor rsea | E5P18_08320 | Not Available | Positive | 1719146 - 1719796 | 24322.8 |
| sigma-e factor regulatory protein rseb | E5P18_08325 | Not Available | Positive | 1719796 - 1720752 | 35751.8 |
| soxr-reducing system protein rsec | E5P18_08330 | Not Available | Positive | 1720749 - 1721228 | 16626.3 |
| elongation factor 4 | E5P18_08335 | Not Available | Positive | 1721426 - 1723225 | 66574.1 |
| signal peptidase i | E5P18_08340 | Not Available | Positive | 1723241 - 1724215 | 35948.3 |
| ribonuclease iii | E5P18_08345 | Not Available | Positive | 1724488 - 1725168 | 25551.6 |
| gtpase era | E5P18_08350 | Not Available | Positive | 1725165 - 1726070 | 33812.1 |
| dna repair protein reco | E5P18_08355 | Not Available | Positive | 1726082 - 1726810 | 27364.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





