Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8357 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1168555 bp
Thymine Count
1162558 bp
Guanine Count
1199099 bp
Cytosine Count
1207583 bp
Genome Length
4737795 bp
Protein-coding Genes
4280 genes
Non-Coding Genes
263 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel-responsive transcriptional regulator nikr | E5P16_20665 | Not Available | Positive | 4253397 - 4253798 | 15094.7 |
| hypothetical protein | E5P16_20670 | Not Available | Positive | 4254001 - 4254208 | 6613.0 |
| hypothetical protein | E5P16_20675 | Not Available | Positive | 4254209 - 4254824 | 23340.2 |
| lyase | E5P16_20680 | Not Available | Positive | 4254845 - 4255687 | 31875.3 |
| type iv secretion protein rhs | E5P16_20690 | Not Available | Positive | 4256314 - 4256673 | 13152.6 |
| sel1 repeat family protein | E5P16_20695 | Not Available | Positive | 4256820 - 4257146 | 12865.2 |
| type iv secretion protein rhs | E5P16_20700 | Not Available | Positive | 4257367 - 4257486 | 4316.13 |
| type iv secretion protein rhs | E5P16_20705 | Not Available | Positive | 4257471 - 4257764 | 10737.6 |
| hypothetical protein | E5P16_20710 | Not Available | Positive | 4257853 - 4258290 | 16094.6 |
| hlyd family secretion protein | E5P16_20715 | Not Available | Negative | 4258750 - 4259886 | 41990.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





