Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8357 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1168555 bp
Thymine Count
1162558 bp
Guanine Count
1199099 bp
Cytosine Count
1207583 bp
Genome Length
4737795 bp
Protein-coding Genes
4280 genes
Non-Coding Genes
263 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna lysidine(34) synthetase tils | E5P16_06335 | Not Available | Positive | 1299713 - 1301011 | 48206.9 |
| rho-binding antiterminator | E5P16_06340 | Not Available | Negative | 1301060 - 1301320 | 9698.45 |
| yaep family protein | E5P16_06345 | Not Available | Negative | 1301307 - 1301507 | 7214.59 |
| yaeq family protein | E5P16_06350 | Not Available | Positive | 1301673 - 1302218 | 20877.7 |
| aminoacyl-trna hydrolase | E5P16_06355 | Not Available | Positive | 1302215 - 1302637 | 15624.0 |
| envelope stress response activation lipoprotein nlpe | E5P16_06360 | Not Available | Positive | 1302651 - 1303361 | 25845.7 |
| yaef family permuted papain-like enzyme | E5P16_06365 | Not Available | Negative | 1303561 - 1304385 | 29913.9 |
| proline--trna ligase | E5P16_06370 | Not Available | Negative | 1304439 - 1306157 | 63626.2 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | E5P16_06375 | Not Available | Negative | 1306269 - 1306976 | 26363.8 |
| rcs stress response system protein rcsf | E5P16_06380 | Not Available | Negative | 1306973 - 1307377 | 14164.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





