Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8229 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1142833 bp
Thymine Count
1145482 bp
Guanine Count
1185241 bp
Cytosine Count
1188682 bp
Genome Length
4662238 bp
Protein-coding Genes
4308 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c-di-gmp phosphodiesterase pdec | E5P08_19450 | Not Available | Positive | 4042790 - 4044376 | 60804.7 |
| superoxide response transcriptional regulator soxs | E5P08_19455 | Not Available | Negative | 4044379 - 4044702 | 12911.6 |
| redox-sensitive transcriptional activator soxr | E5P08_19460 | Not Available | Positive | 4044788 - 4045252 | 17150.7 |
| ncs2 family permease | E5P08_19465 | Not Available | Positive | 4045798 - 4047147 | 45714.4 |
| na+/h+ antiporter | E5P08_19470 | Not Available | Positive | 4047299 - 4048948 | 60527.5 |
| pentapeptide repeat-containing protein | E5P08_19475 | Not Available | Negative | 4049102 - 4049598 | 18552.2 |
| fatty acyl-amp ligase | E5P08_19480 | Not Available | Positive | 4049843 - 4051573 | 63610.2 |
| nad-dependent epimerase/dehydratase family protein | E5P08_19485 | Not Available | Positive | 4051570 - 4052484 | 33498.2 |
| acyl carrier protein | E5P08_19490 | Not Available | Positive | 4052516 - 4052764 | 9417.69 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | E5P08_19495 | Not Available | Positive | 4052764 - 4053936 | 41729.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





