Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8229 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1142833 bp
Thymine Count
1145482 bp
Guanine Count
1185241 bp
Cytosine Count
1188682 bp
Genome Length
4662238 bp
Protein-coding Genes
4308 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system response regulator baer | E5P08_18475 | Not Available | Positive | 3843826 - 3844548 | 27657.5 |
| duf1508 domain-containing protein | E5P08_18480 | Not Available | Positive | 3844739 - 3845071 | 11994.9 |
| u32 family peptidase | E5P08_18485 | Not Available | Positive | 3845218 - 3846579 | 51167.1 |
| hypothetical protein | E5P08_18490 | Not Available | Negative | 3846713 - 3846922 | 7886.79 |
| hypothetical protein | E5P08_18495 | Not Available | Negative | 3846910 - 3847227 | 11465.9 |
| succinate dehydrogenase cytochrome b556 subunit | E5P08_18500 | Not Available | Positive | 3847597 - 3847986 | 14300.0 |
| succinate dehydrogenase membrane anchor subunit | E5P08_18505 | Not Available | Positive | 3847980 - 3848327 | 12868.3 |
| succinate dehydrogenase flavoprotein subunit | E5P08_18510 | Not Available | Positive | 3848327 - 3850093 | 64425.6 |
| succinate dehydrogenase iron-sulfur subunit | E5P08_18515 | Not Available | Positive | 3850109 - 3850825 | 26785.4 |
| 2-oxoglutarate dehydrogenase e1 component | E5P08_18520 | Not Available | Positive | 3851026 - 3853827 | 105068.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





