Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8229 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1142833 bp
Thymine Count
1145482 bp
Guanine Count
1185241 bp
Cytosine Count
1188682 bp
Genome Length
4662238 bp
Protein-coding Genes
4308 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome silencing factor | E5P08_17835 | Not Available | Positive | 3724069 - 3724386 | 11582.9 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | E5P08_17840 | Not Available | Positive | 3724390 - 3724857 | 17342.1 |
| peptidoglycan dd-transpeptidase mrda | E5P08_17845 | Not Available | Positive | 3724888 - 3726789 | 70860.6 |
| peptidoglycan glycosyltransferase mrdb | E5P08_17850 | Not Available | Positive | 3726792 - 3727904 | 40478.6 |
| endolytic peptidoglycan transglycosylase rlpa | E5P08_17855 | Not Available | Positive | 3727915 - 3729003 | 37530.1 |
| serine-type d-ala-d-ala carboxypeptidase | E5P08_17860 | Not Available | Positive | 3729142 - 3730353 | 44446.5 |
| duf493 family protein | E5P08_17865 | Not Available | Positive | 3730463 - 3730726 | 9827.92 |
| lipoyl(octanoyl) transferase lipb | E5P08_17870 | Not Available | Positive | 3730827 - 3731468 | 23884.0 |
| shie | E5P08_17875 | Not Available | Positive | 3731668 - 3731731 | 2455.3 |
| phospholipid-binding lipoprotein mlaa | E5P08_17880 | Not Available | Negative | 3731891 - 3732646 | 28009.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





