Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8198 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1135996 bp
Thymine Count
1138525 bp
Guanine Count
1167899 bp
Cytosine Count
1174121 bp
Genome Length
4616541 bp
Protein-coding Genes
4139 genes
Non-Coding Genes
286 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent succinate-semialdehyde dehydrogenase i | E5P07_13205 | Not Available | Positive | 2757491 - 2758939 | 51742.0 |
| 4-aminobutyrate--2-oxoglutarate transaminase | E5P07_13210 | Not Available | Positive | 2758953 - 2760233 | 45769.4 |
| gaba permease | E5P07_13215 | Not Available | Positive | 2760471 - 2761871 | 51055.0 |
| dna-binding transcriptional regulator csir | E5P07_13220 | Not Available | Positive | 2761892 - 2762554 | 24992.3 |
| potassium binding protein kbp | E5P07_13225 | Not Available | Negative | 2762555 - 2763004 | 16033.9 |
| yqae/pmp3 family membrane protein | E5P07_13230 | Not Available | Negative | 2763088 - 2763246 | 5865.57 |
| transcriptional regulator | E5P07_13235 | Not Available | Positive | 2763429 - 2763728 | 10596.9 |
| thiosulfate sulfurtransferase ygap | E5P07_13240 | Not Available | Positive | 2763738 - 2764262 | 18669.0 |
| dna-binding protein stpa | E5P07_13245 | Not Available | Negative | 2764309 - 2764713 | 15348.4 |
| l-alanine exporter alae | E5P07_13250 | Not Available | Positive | 2765382 - 2765831 | 16950.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





