Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8198 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1135996 bp
Thymine Count
1138525 bp
Guanine Count
1167899 bp
Cytosine Count
1174121 bp
Genome Length
4616541 bp
Protein-coding Genes
4139 genes
Non-Coding Genes
286 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna/rrna methyltransferase | E5P07_12345 | Not Available | Positive | 2573603 - 2574640 | 37786.5 |
| uracil-dna glycosylase | E5P07_12350 | Not Available | Negative | 2574688 - 2575377 | 25663.6 |
| autonomous glycyl radical cofactor grca | E5P07_12355 | Not Available | Positive | 2575681 - 2576064 | 14269.0 |
| cysteine/o-acetylserine transporter | E5P07_12360 | Not Available | Negative | 2576120 - 2576707 | 21293.6 |
| lysr family transcriptional regulator | E5P07_12365 | Not Available | Positive | 2576809 - 2577690 | 33273.3 |
| atp-dependent rna helicase srmb | E5P07_12370 | Not Available | Negative | 2577899 - 2579233 | 49902.0 |
| trna(1)(val) (adenine(37)-n(6))-methyltransferase | E5P07_12375 | Not Available | Positive | 2579365 - 2580102 | 27283.5 |
| l-aspartate oxidase | E5P07_12380 | Not Available | Negative | 2580087 - 2581709 | 60236.8 |
| rpoe leader peptide rsed | E5P07_12385 | Not Available | Positive | 2581965 - 2582120 | 6229.83 |
| rna polymerase sigma factor rpoe | E5P07_12390 | Not Available | Positive | 2582117 - 2582692 | 21697.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





