Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8198 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1135996 bp
Thymine Count
1138525 bp
Guanine Count
1167899 bp
Cytosine Count
1174121 bp
Genome Length
4616541 bp
Protein-coding Genes
4139 genes
Non-Coding Genes
286 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase recg | E5P07_12190 | Not Available | Negative | 2542782 - 2544863 | 76451.1 |
| trna (guanosine(18)-2'-o)-methyltransferase trmh | E5P07_12195 | Not Available | Negative | 2544869 - 2545558 | 25344.6 |
| bifunctional gtp diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | E5P07_12200 | Not Available | Negative | 2545565 - 2547673 | 79324.1 |
| dna-directed rna polymerase subunit omega | E5P07_12205 | Not Available | Negative | 2547692 - 2547967 | 10237.2 |
| guanylate kinase | E5P07_12210 | Not Available | Negative | 2548022 - 2548645 | 23594.1 |
| nad-dependent dna ligase ligb | E5P07_12215 | Not Available | Positive | 2548903 - 2550585 | 63212.8 |
| trimeric intracellular cation channel family protein | E5P07_12220 | Not Available | Negative | 2550582 - 2551199 | 22049.8 |
| dna damage-inducible protein d | E5P07_12225 | Not Available | Negative | 2551490 - 2552314 | 31217.8 |
| yicc family protein | E5P07_12230 | Not Available | Negative | 2552535 - 2553398 | 33160.9 |
| ribonuclease ph | E5P07_12235 | Not Available | Positive | 2553525 - 2554241 | 25313.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





