Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8192 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1138233 bp
Thymine Count
1139470 bp
Guanine Count
1186435 bp
Cytosine Count
1156071 bp
Genome Length
4620209 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
317 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyd operon protein ybge | E5P03_19760 | Not Available | Negative | 4068844 - 4069137 | 10933.0 |
| cytochrome bd-i oxidase subunit cydx | E5P03_19765 | Not Available | Negative | 4069137 - 4069250 | 4041.9 |
| cytochrome d ubiquinol oxidase subunit ii | E5P03_19770 | Not Available | Negative | 4069265 - 4070404 | 42455.6 |
| cytochrome bd-i ubiquinol oxidase subunit cyda | E5P03_19775 | Not Available | Negative | 4070420 - 4071988 | 58208.4 |
| response regulator transcription factor | E5P03_19780 | Not Available | Positive | 4072658 - 4073383 | 27033.6 |
| dna-binding transcriptional activator bglj | E5P03_19785 | Not Available | Positive | 4073341 - 4074018 | 25621.1 |
| hydroxamate siderophore iron reductase fhuf | E5P03_19790 | Not Available | Negative | 4074056 - 4074844 | 29977.2 |
| duf1435 domain-containing protein | E5P03_19795 | Not Available | Positive | 4074985 - 4075221 | 8689.37 |
| Trna-leu | Not Available | Not Available | Positive | 4075260 - 4075346 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 4075381 - 4075467 | Not Available |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





