Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8192 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1138233 bp
Thymine Count
1139470 bp
Guanine Count
1186435 bp
Cytosine Count
1156071 bp
Genome Length
4620209 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
317 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase rava | E5P03_17120 | Not Available | Negative | 3572777 - 3574273 | 56418.1 |
| low affinity potassium transporter kup | E5P03_17125 | Not Available | Positive | 3574496 - 3576364 | 69298.3 |
| d-ribose pyranase | E5P03_17130 | Not Available | Positive | 3576531 - 3576950 | 15293.4 |
| ribose abc transporter atp-binding protein rbsa | E5P03_17135 | Not Available | Positive | 3576958 - 3578463 | 55045.0 |
| ribose abc transporter permease | E5P03_17140 | Not Available | Positive | 3578468 - 3579433 | 33454.0 |
| ribose abc transporter substrate-binding protein rbsb | E5P03_17145 | Not Available | Positive | 3579458 - 3580348 | 30940.2 |
| ribokinase | E5P03_17150 | Not Available | Positive | 3580474 - 3581403 | 32292.4 |
| transcriptional regulator rbsr | E5P03_17155 | Not Available | Positive | 3581407 - 3582399 | 36614.1 |
| dha2 family efflux mfs transporter permease subunit | E5P03_17160 | Not Available | Negative | 3582365 - 3583792 | 51464.9 |
| fadr family transcriptional regulator | E5P03_17165 | Not Available | Negative | 3583815 - 3584507 | 26077.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





