Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8192 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1138233 bp
Thymine Count
1139470 bp
Guanine Count
1186435 bp
Cytosine Count
1156071 bp
Genome Length
4620209 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
317 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| knotted carbamoyltransferase ygew | E5P03_15380 | Not Available | Negative | 3208929 - 3210116 | 44058.7 |
| sigma-54-dependent transcriptional regulator | E5P03_15385 | Not Available | Positive | 3210595 - 3212373 | 66073.0 |
| xanthine dehydrogenase iron sulfur-binding subunit xdhc | E5P03_15390 | Not Available | Negative | 3212413 - 3212892 | 16922.7 |
| xanthine dehydrogenase fad-binding subunit xdhb | E5P03_15395 | Not Available | Negative | 3212889 - 3213767 | 31558.6 |
| xanthine dehydrogenase molybdenum-binding subunit xdha | E5P03_15400 | Not Available | Negative | 3213778 - 3216075 | 82690.1 |
| lysm peptidoglycan-binding domain-containing protein | E5P03_15405 | Not Available | Positive | 3216490 - 3217245 | 26540.0 |
| Trna-gly | Not Available | Not Available | Positive | 3217324 - 3217397 | Not Available |
| hypothetical protein | E5P03_15415 | Not Available | Positive | 3217635 - 3218768 | 42200.1 |
| escr/yscr/hrcr family type iii secretion system export apparatus protein | E5P03_15425 | Not Available | Positive | 3220313 - 3220978 | 24696.6 |
| escs/yscs/hrcs family type iii secretion system export apparatus protein | E5P03_15430 | Not Available | Positive | 3220988 - 3221248 | 9430.85 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





