Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8160 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1202233 bp
Thymine Count
1205980 bp
Guanine Count
1248745 bp
Cytosine Count
1229318 bp
Genome Length
4886276 bp
Protein-coding Genes
4266 genes
Non-Coding Genes
388 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase ii | E5P01_18065 | Not Available | Negative | 3743485 - 3745836 | 89999.6 |
| l-ribulose-5-phosphate 4-epimerase | E5P01_18070 | Not Available | Negative | 3745911 - 3746606 | 25533.4 |
| l-arabinose isomerase | E5P01_18075 | Not Available | Negative | 3746806 - 3748308 | 56078.1 |
| ribulokinase | E5P01_18080 | Not Available | Negative | 3748319 - 3750019 | 61229.8 |
| arabinose operon transcriptional regulator arac | E5P01_18085 | Not Available | Positive | 3750358 - 3751236 | 33385.8 |
| deda family protein | E5P01_18090 | Not Available | Positive | 3751322 - 3752086 | 28213.8 |
| thiamine abc transporter atp-binding protein thiq | E5P01_18095 | Not Available | Negative | 3752200 - 3752898 | 25014.7 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | E5P01_18100 | Not Available | Negative | 3752882 - 3754492 | 59399.5 |
| thiamine abc transporter substrate binding subunit | E5P01_18105 | Not Available | Negative | 3754468 - 3755451 | 36155.2 |
| type iii effector | E5P01_18110 | Not Available | Positive | 3755823 - 3756392 | 21485.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





