Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8160 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1202233 bp
Thymine Count
1205980 bp
Guanine Count
1248745 bp
Cytosine Count
1229318 bp
Genome Length
4886276 bp
Protein-coding Genes
4266 genes
Non-Coding Genes
388 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | E5P01_17460 | Not Available | Negative | 3608850 - 3610151 | 48087.1 |
| two-component sensor histidine kinase bara | E5P01_17465 | Not Available | Positive | 3610208 - 3612964 | 102460.0 |
| glucarate dehydratase | E5P01_17470 | Not Available | Negative | 3613196 - 3614536 | 49143.9 |
| glucarate dehydratase | E5P01_17475 | Not Available | Negative | 3614557 - 3615897 | 48914.4 |
| mfs transporter | E5P01_17480 | Not Available | Negative | 3615899 - 3617251 | 49145.0 |
| flavodoxin | E5P01_17485 | Not Available | Negative | 3617686 - 3618135 | 16275.1 |
| trna pseudouridine(65) synthase truc | E5P01_17490 | Not Available | Negative | 3618153 - 3618935 | 29667.5 |
| yqcc family protein | E5P01_17495 | Not Available | Negative | 3618935 - 3619264 | 12773.2 |
| secy-interacting protein | E5P01_17500 | Not Available | Negative | 3619886 - 3620431 | 20709.6 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | E5P01_17505 | Not Available | Positive | 3620499 - 3621347 | 32559.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





