Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8160 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1202233 bp
Thymine Count
1205980 bp
Guanine Count
1248745 bp
Cytosine Count
1229318 bp
Genome Length
4886276 bp
Protein-coding Genes
4266 genes
Non-Coding Genes
388 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate hydrogenlyase regulatory protein hyca | E5P01_17145 | Not Available | Negative | 3545246 - 3545707 | 17627.9 |
| hydrogenase maturation nickel metallochaperone hypa | E5P01_17150 | Not Available | Positive | 3545919 - 3546269 | 13168.9 |
| hydrogenase nickel incorporation protein hypb | E5P01_17155 | Not Available | Positive | 3546273 - 3547145 | 31566.8 |
| hydrogenase 3 maturation protein hypc | E5P01_17160 | Not Available | Positive | 3547136 - 3547408 | 9732.58 |
| hydrogenase formation protein hypd | E5P01_17165 | Not Available | Positive | 3547408 - 3548529 | 41366.7 |
| hydrogenase maturation carbamoyl dehydratase hype | E5P01_17170 | Not Available | Positive | 3548526 - 3549536 | 35110.6 |
| formate hydrogenlyase transcriptional activator flha | E5P01_17175 | Not Available | Positive | 3549610 - 3551688 | 78415.4 |
| nitrous oxide-stimulated promoter family protein | E5P01_17180 | Not Available | Negative | 3551725 - 3552078 | 13904.1 |
| hypothetical protein | E5P01_17185 | Not Available | Negative | 3552110 - 3552289 | 6752.81 |
| dna mismatch repair protein muts | E5P01_17190 | Not Available | Positive | 3552365 - 3554926 | 95337.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





