Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8160 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1202233 bp
Thymine Count
1205980 bp
Guanine Count
1248745 bp
Cytosine Count
1229318 bp
Genome Length
4886276 bp
Protein-coding Genes
4266 genes
Non-Coding Genes
388 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(+) kinase | E5P01_16745 | Not Available | Positive | 3467838 - 3468716 | 32568.3 |
| dna repair protein recn | E5P01_16750 | Not Available | Positive | 3468802 - 3470463 | 61391.1 |
| outer membrane protein assembly factor bame | E5P01_16755 | Not Available | Positive | 3470612 - 3470953 | 12302.8 |
| rnfh family protein | E5P01_16760 | Not Available | Negative | 3471015 - 3471305 | 10806.0 |
| type ii toxin-antitoxin system toxin rata | E5P01_16765 | Not Available | Negative | 3471295 - 3471771 | 17743.7 |
| ssra-binding protein smpb | E5P01_16770 | Not Available | Positive | 3471903 - 3472385 | 18270.1 |
| Tmrna,resume consensus sequence (at 83): aatagtcgcaaacgacga | Not Available | Not Available | Positive | 3472600 - 3472962 | Not Available |
| adhesin-like autotransporter ypja | E5P01_16780 | Not Available | Negative | 3473123 - 3477703 | 157688.0 |
| atpase | E5P01_16785 | Not Available | Negative | 3477768 - 3477887 | 4328.2 |
| dna invertase | E5P01_16790 | Not Available | Negative | 3478042 - 3478260 | 8151.23 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





