Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8160 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1202233 bp
Thymine Count
1205980 bp
Guanine Count
1248745 bp
Cytosine Count
1229318 bp
Genome Length
4886276 bp
Protein-coding Genes
4266 genes
Non-Coding Genes
388 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna utilization protein hofm | E5P01_16385 | Not Available | Positive | 3403967 - 3404746 | 29064.0 |
| dna utilization protein hofn | E5P01_16390 | Not Available | Positive | 3404746 - 3405285 | 20853.2 |
| dna utilization protein hofo | E5P01_16395 | Not Available | Positive | 3405269 - 3405709 | 17020.3 |
| dna utilization protein hofp | E5P01_16400 | Not Available | Positive | 3405699 - 3406103 | 15071.0 |
| dna transporter hofq | E5P01_16405 | Not Available | Positive | 3406015 - 3407253 | 44776.9 |
| shikimate kinase arok | E5P01_16410 | Not Available | Positive | 3407654 - 3408175 | 19539.2 |
| 3-dehydroquinate synthase | E5P01_16415 | Not Available | Positive | 3408232 - 3409320 | 38906.4 |
| cell division protein damx | E5P01_16420 | Not Available | Positive | 3409412 - 3410698 | 46092.2 |
| adenine-specific dna-methyltransferase | E5P01_16425 | Not Available | Positive | 3410805 - 3411641 | 32087.2 |
| ribulose-phosphate 3-epimerase | E5P01_16430 | Not Available | Positive | 3411659 - 3412336 | 24555.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





