Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8160 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1202233 bp
Thymine Count
1205980 bp
Guanine Count
1248745 bp
Cytosine Count
1229318 bp
Genome Length
4886276 bp
Protein-coding Genes
4266 genes
Non-Coding Genes
388 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autotransporter outer membrane beta-barrel domain-containing protein | E5P01_13035 | Not Available | Negative | 2680281 - 2682602 | 82451.4 |
| hypothetical protein | E5P01_13040 | Not Available | Negative | 2683329 - 2683547 | 8228.32 |
| cyclic diguanylate phosphodiesterase | E5P01_13045 | Not Available | Negative | 2683679 - 2685202 | 56828.0 |
| hypothetical protein | E5P01_13050 | Not Available | Negative | 2685538 - 2685786 | 9701.79 |
| biofilm/acid-resistance regulator arir | E5P01_13055 | Not Available | Negative | 2685899 - 2686165 | 9710.59 |
| two-component-system connector protein ymga | E5P01_13060 | Not Available | Negative | 2686194 - 2686466 | 10287.5 |
| two-component-system connector protein ycgz | E5P01_13065 | Not Available | Negative | 2686509 - 2686745 | 8743.5 |
| blue light-responsive regulator bluf | E5P01_13070 | Not Available | Positive | 2687059 - 2688270 | 45314.5 |
| merr family transcriptional regulator | E5P01_13075 | Not Available | Positive | 2688475 - 2689206 | 28218.1 |
| duf1398 domain-containing protein | E5P01_13080 | Not Available | Positive | 2689427 - 2689831 | 15770.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





