Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8160 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1202233 bp
Thymine Count
1205980 bp
Guanine Count
1248745 bp
Cytosine Count
1229318 bp
Genome Length
4886276 bp
Protein-coding Genes
4266 genes
Non-Coding Genes
388 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i dna topoisomerase | E5P01_12465 | Not Available | Negative | 2564208 - 2566805 | 97342.0 |
| duf2498 family protein | E5P01_12470 | Not Available | Positive | 2567185 - 2567436 | 9386.17 |
| protease sohb | E5P01_12475 | Not Available | Negative | 2567472 - 2568521 | 39368.7 |
| ycik family oxidoreductase | E5P01_12480 | Not Available | Positive | 2568741 - 2569499 | 27943.5 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | E5P01_12485 | Not Available | Positive | 2569496 - 2570086 | 22058.2 |
| 23s rrna pseudouridine(2605) synthase rlub | E5P01_12490 | Not Available | Negative | 2570126 - 2571001 | 32713.4 |
| duf2207 domain-containing protein | E5P01_12495 | Not Available | Negative | 2571214 - 2573109 | 71381.2 |
| threonylcarbamoyl-amp synthase | E5P01_12500 | Not Available | Negative | 2573137 - 2573757 | 23213.2 |
| 5'-3' exoribonuclease | E5P01_12505 | Not Available | Negative | 2573754 - 2574635 | 32619.8 |
| trp operon leader peptide | E5P01_12510 | Not Available | Positive | 2574773 - 2574817 | 1723.19 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





