Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8160 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1202233 bp
Thymine Count
1205980 bp
Guanine Count
1248745 bp
Cytosine Count
1229318 bp
Genome Length
4886276 bp
Protein-coding Genes
4266 genes
Non-Coding Genes
388 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine betaine abc transporter substrate-binding protein osmf | E5P01_11335 | Not Available | Positive | 2313141 - 2314058 | 32638.0 |
| glycine betaine abc transporter permease yehy | E5P01_11340 | Not Available | Positive | 2314065 - 2315222 | 41280.4 |
| glycine betaine abc transporter atp binding protein yehx | E5P01_11345 | Not Available | Positive | 2315215 - 2316141 | 34498.7 |
| glycine betaine abc transporter permease yehw | E5P01_11350 | Not Available | Positive | 2316146 - 2316877 | 25530.1 |
| protein yoho | E5P01_11355 | Not Available | Negative | 2316858 - 2316965 | 3642.85 |
| hth-type transcriptional regulator mlra | E5P01_11360 | Not Available | Negative | 2317025 - 2317756 | 28047.8 |
| two-component regulatory system sensor histidine kinase btss | E5P01_11365 | Not Available | Positive | 2317978 - 2319663 | 62096.3 |
| two-component system response regulator btsr | E5P01_11370 | Not Available | Positive | 2319660 - 2320379 | 27401.4 |
| duf1456 family protein | E5P01_11375 | Not Available | Positive | 2320426 - 2320896 | 18003.9 |
| duf1307 domain-containing protein | E5P01_11380 | Not Available | Negative | 2320937 - 2321398 | 16595.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





