Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8160 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1202233 bp
Thymine Count
1205980 bp
Guanine Count
1248745 bp
Cytosine Count
1229318 bp
Genome Length
4886276 bp
Protein-coding Genes
4266 genes
Non-Coding Genes
388 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nupc/nupg family nucleoside cnt transporter | E5P01_11180 | Not Available | Positive | 2278478 - 2279728 | 43484.3 |
| sugar kinase | E5P01_11185 | Not Available | Negative | 2279784 - 2280872 | 39708.6 |
| deoxyribonuclease iv | E5P01_11190 | Not Available | Negative | 2280875 - 2281732 | 31481.2 |
| yeih family protein | E5P01_11195 | Not Available | Negative | 2281806 - 2282855 | 36884.3 |
| lysr family transcriptional regulator | E5P01_11200 | Not Available | Positive | 2282954 - 2283835 | 32729.7 |
| lysine-specific permease | E5P01_11205 | Not Available | Positive | 2284040 - 2285509 | 53579.0 |
| catecholate siderophore receptor cira | E5P01_11215 | Not Available | Positive | 2285801 - 2287780 | 73386.9 |
| s-formylglutathione hydrolase yeig | E5P01_11220 | Not Available | Negative | 2287812 - 2288648 | 31330.0 |
| gtp cyclohydrolase i fole | E5P01_11225 | Not Available | Positive | 2288906 - 2289574 | 24832.1 |
| duf418 family protein | E5P01_11230 | Not Available | Positive | 2289591 - 2290748 | 43381.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





