Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8160 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1202233 bp
Thymine Count
1205980 bp
Guanine Count
1248745 bp
Cytosine Count
1229318 bp
Genome Length
4886276 bp
Protein-coding Genes
4266 genes
Non-Coding Genes
388 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein ypdk | E5P01_09930 | Not Available | Negative | 2016405 - 2016476 | 2704.57 |
| kdo(2)-lipid iv(a) palmitoleoyltransferase | E5P01_09935 | Not Available | Negative | 2016832 - 2017752 | 35525.5 |
| duf2545 family protein | E5P01_09940 | Not Available | Positive | 2018105 - 2018347 | 8923.5 |
| hypothetical protein | E5P01_09945 | Not Available | Negative | 2018424 - 2018699 | 10096.3 |
| yfdx family protein | E5P01_09950 | Not Available | Positive | 2018995 - 2019627 | 22907.4 |
| formyl-coa transferase | E5P01_09955 | Not Available | Positive | 2020139 - 2021389 | 45860.7 |
| oxalyl-coa decarboxylase | E5P01_09960 | Not Available | Positive | 2021443 - 2023137 | 60584.8 |
| transporter yfdv | E5P01_09965 | Not Available | Positive | 2023207 - 2024151 | 33617.9 |
| coa:oxalate coa-transferase | E5P01_09970 | Not Available | Positive | 2024225 - 2025370 | 41687.2 |
| acid-sensing system histidine kinase evgs | E5P01_09975 | Not Available | Negative | 2025426 - 2029019 | 134981.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





