Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8160 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1202233 bp
Thymine Count
1205980 bp
Guanine Count
1248745 bp
Cytosine Count
1229318 bp
Genome Length
4886276 bp
Protein-coding Genes
4266 genes
Non-Coding Genes
388 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | E5P01_09725 | Not Available | Positive | 1978324 - 1979073 | 28286.4 |
| escc/yscc/hrcc family type iii secretion system outer membrane ring protein | E5P01_09730 | Not Available | Positive | 1979070 - 1980773 | 62739.4 |
| yopn family type iii secretion system gatekeeper subunit | E5P01_09735 | Not Available | Positive | 1980778 - 1981923 | 43548.6 |
| escv/yscv/hrcv family type iii secretion system export apparatus protein | E5P01_09740 | Not Available | Positive | 1981916 - 1983976 | 76409.5 |
| flii/yscn family atpase | E5P01_09745 | Not Available | Positive | 1984008 - 1985300 | 47573.4 |
| type iii secretion protein | E5P01_09750 | Not Available | Positive | 1985290 - 1985748 | 18303.4 |
| effector protein | E5P01_09760 | Not Available | Positive | 1986032 - 1986601 | 22213.1 |
| yscq/hrcq family type iii secretion apparatus protein | E5P01_09765 | Not Available | Positive | 1986601 - 1987548 | 36326.5 |
| escr/yscr/hrcr family type iii secretion system export apparatus protein | E5P01_09770 | Not Available | Positive | 1987538 - 1988203 | 24544.5 |
| escs/yscs/hrcs family type iii secretion system export apparatus protein | E5P01_09775 | Not Available | Positive | 1988213 - 1988473 | 9430.85 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





