Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 910395 - 910471 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 910505 - 910581 | Not Available |
| n-acetylmuramoyl-l-alanine amidase | E5P00_04300 | Not Available | Negative | 910655 - 911908 | 45637.1 |
| amino-acid n-acetyltransferase | E5P00_04305 | Not Available | Positive | 912140 - 913471 | 49198.1 |
| recbcd enzyme subunit recd | E5P00_04310 | Not Available | Negative | 913533 - 915359 | 66906.3 |
| recbcd enzyme subunit recb | E5P00_04315 | Not Available | Negative | 915359 - 918901 | 133967.0 |
| pitrilysin | E5P00_04320 | Not Available | Negative | 918894 - 921782 | 107714.0 |
| recbcd enzyme subunit recc | E5P00_04325 | Not Available | Negative | 921958 - 925326 | 128855.0 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | E5P00_04330 | Not Available | Negative | 925339 - 925662 | 12004.7 |
| duf2509 family protein | E5P00_04335 | Not Available | Negative | 925647 - 926054 | 14958.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





