Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pkhd-type hydroxylase ybix | E5P00_03940 | Not Available | Negative | 831745 - 832422 | 25530.2 |
| catecholate siderophore receptor fiu | E5P00_03945 | Not Available | Negative | 832464 - 834746 | 81964.5 |
| duf1471 domain-containing protein | E5P00_03950 | Not Available | Negative | 835011 - 835271 | 8896.65 |
| 23s rrna (adenine(1618)-n(6))-methyltransferase rlmf | E5P00_03955 | Not Available | Positive | 835466 - 836473 | 37351.7 |
| mechanosensitive channel protein | E5P00_03960 | Not Available | Negative | 836470 - 838695 | 81908.5 |
| glutamine abc transporter atp-binding protein glnq | E5P00_03965 | Not Available | Negative | 838956 - 839678 | 26732.6 |
| glutamine abc transporter permease | E5P00_03970 | Not Available | Negative | 839675 - 840334 | 24365.8 |
| glutamine abc transporter substrate-binding protein glnh | E5P00_03975 | Not Available | Negative | 840472 - 841218 | 27191.5 |
| dna starvation/stationary phase protection protein | E5P00_03980 | Not Available | Negative | 841622 - 842125 | 18696.3 |
| threonine/homoserine exporter rhta | E5P00_03985 | Not Available | Negative | 842424 - 843311 | 31158.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





