Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | E5P00_03890 | Not Available | Negative | 820460 - 822196 | 63136.3 |
| secretion protein hlyd | E5P00_03895 | Not Available | Negative | 822189 - 823184 | 36287.7 |
| dna-binding transcriptional regulator cecr | E5P00_03900 | Not Available | Negative | 823187 - 823858 | 25018.1 |
| atp-dependent rna helicase rhle | E5P00_03905 | Not Available | Positive | 824087 - 825451 | 49992.4 |
| n-glycosidase ybia | E5P00_03910 | Not Available | Negative | 825683 - 826165 | 18670.3 |
| atp-dependent dna helicase ding | E5P00_03915 | Not Available | Positive | 826285 - 828435 | 81444.9 |
| dna-binding protein ybib | E5P00_03920 | Not Available | Positive | 828463 - 829425 | 35050.7 |
| malate/lactate/ureidoglycolate dehydrogenase | E5P00_03925 | Not Available | Positive | 829566 - 830651 | 38899.3 |
| duf1471 domain-containing protein | E5P00_03930 | Not Available | Negative | 830880 - 831140 | 8568.2 |
| c4-type zinc finger protein ybii | E5P00_03935 | Not Available | Negative | 831405 - 831671 | 9756.33 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





