Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dimethyl sulfoxide reductase anchor subunit | E5P00_02830 | Not Available | Positive | 588742 - 589596 | 30525.6 |
| tat proofreading chaperone dmsd | E5P00_02835 | Not Available | Positive | 589639 - 590253 | 23345.8 |
| voltage-gated clc-type chloride channel clcb | E5P00_02840 | Not Available | Positive | 590412 - 591704 | 45690.0 |
| atp-dependent dethiobiotin synthetase biod | E5P00_02845 | Not Available | Negative | 591657 - 592352 | 24982.5 |
| dna-binding transcriptional repressor mlc | E5P00_02850 | Not Available | Negative | 592477 - 593697 | 44318.8 |
| lysr family transcriptional regulator | E5P00_02855 | Not Available | Negative | 593832 - 594725 | 33283.4 |
| mfs transporter | E5P00_02860 | Not Available | Positive | 594832 - 596085 | 45260.2 |
| acid shock protein | E5P00_02865 | Not Available | Positive | 596482 - 596817 | 11639.1 |
| hypothetical protein | E5P00_02870 | Not Available | Positive | 596910 - 596993 | 3206.2 |
| serine protease | E5P00_02875 | Not Available | Positive | 597093 - 597914 | 29278.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





