Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stress-induced protein ychh | E5P00_02290 | Not Available | Positive | 486429 - 486707 | 10486.9 |
| c4-dicarboxylic acid transporter daua | E5P00_02295 | Not Available | Negative | 486762 - 488441 | 59432.8 |
| ribose-phosphate pyrophosphokinase | E5P00_02300 | Not Available | Negative | 488566 - 489513 | 34220.3 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | E5P00_02305 | Not Available | Negative | 489664 - 490515 | 30927.1 |
| lipoprotein localization protein lolb | E5P00_02310 | Not Available | Negative | 490515 - 491138 | 23552.1 |
| glutamyl-trna reductase | E5P00_02315 | Not Available | Positive | 491352 - 492608 | 46309.5 |
| peptide chain release factor 1 | E5P00_02320 | Not Available | Positive | 492650 - 493732 | 40533.7 |
| peptide chain release factor n(5)-glutamine methyltransferase | E5P00_02325 | Not Available | Positive | 493732 - 494565 | 30976.8 |
| sirb family protein | E5P00_02330 | Not Available | Positive | 494562 - 494954 | 14653.7 |
| tetratricopeptide repeat-containing protein | E5P00_02335 | Not Available | Positive | 494958 - 495767 | 30843.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





