Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylpropionate dioxygenase ferredoxin reductase subunit | E5P00_02140 | Not Available | Positive | 444900 - 446102 | 43994.8 |
| doxx family protein | E5P00_02145 | Not Available | Positive | 446199 - 446621 | 15212.3 |
| aldose 1-epimerase | E5P00_02150 | Not Available | Negative | 446669 - 447541 | 32718.1 |
| alcohol dehydrogenase | E5P00_02155 | Not Available | Negative | 447553 - 448614 | 38053.0 |
| abc transporter permease | E5P00_02160 | Not Available | Negative | 448680 - 449678 | 34485.6 |
| sugar abc transporter atp-binding protein | E5P00_02165 | Not Available | Negative | 449703 - 451214 | 55033.8 |
| sugar abc transporter substrate-binding protein | E5P00_02170 | Not Available | Negative | 451237 - 452220 | 35058.2 |
| duf5107 domain-containing protein | E5P00_02175 | Not Available | Negative | 452317 - 455598 | 123872.0 |
| rok family protein | E5P00_02180 | Not Available | Positive | 455716 - 456909 | 44568.4 |
| serine hydroxymethyltransferase | E5P00_02185 | Not Available | Negative | 457107 - 458360 | 45319.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





