Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyl-diaminopimelate desuccinylase | E5P00_01780 | Not Available | Positive | 364874 - 366001 | 41271.4 |
| ypfn family protein | E5P00_01785 | Not Available | Positive | 366029 - 366229 | 8071.78 |
| esterase | E5P00_01790 | Not Available | Negative | 366339 - 367037 | 24856.5 |
| trna cytosine(34) acetyltransferase tmca | E5P00_01795 | Not Available | Negative | 367111 - 369126 | 74896.7 |
| neutral zinc metallopeptidase | E5P00_01800 | Not Available | Negative | 369141 - 370004 | 31462.0 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | E5P00_01805 | Not Available | Negative | 370172 - 370885 | 26996.5 |
| outer membrane protein assembly factor bamc | E5P00_01810 | Not Available | Negative | 371098 - 372132 | 36844.5 |
| 4-hydroxy-tetrahydrodipicolinate synthase | E5P00_01815 | Not Available | Negative | 372149 - 373027 | 31285.9 |
| glycine cleavage system transcriptional repressor | E5P00_01820 | Not Available | Positive | 373173 - 373745 | 20769.8 |
| thioredoxin-dependent thiol peroxidase | E5P00_01825 | Not Available | Positive | 373745 - 374215 | 17634.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





