Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trbi | E5P00_24405 | Not Available | Negative | 4845415 - 4846364 | 33130.2 |
| o-antigen ligase family protein | E5P00_24410 | Not Available | Positive | 4846365 - 4846611 | 8907.4 |
| lipopolysaccharide heptosyltransferase family protein | E5P00_24415 | Not Available | Negative | 4846643 - 4847452 | 31476.0 |
| type iv secretion protein rhs | E5P00_24420 | Not Available | Positive | 4847453 - 4848506 | 39747.7 |
| is4-like element isvsa5 family transposase | E5P00_24425 | Not Available | Negative | 4848507 - 4849551 | 40009.6 |
| rhs repeat protein | E5P00_24430 | Not Available | Positive | 4849552 - 4850580 | 38771.6 |
| hypothetical protein | E5P00_24435 | Not Available | Positive | 4850604 - 4850798 | 7396.92 |
| rhs repeat protein | E5P00_24440 | Not Available | Negative | 4851598 - 4852587 | 37285.5 |
| rhs repeat protein | E5P00_24445 | Not Available | Negative | 4852619 - 4853566 | 35687.2 |
| cold shock protein cspi | E5P00_24450 | Not Available | Positive | 4853663 - 4853875 | 7684.14 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





