Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type-f conjugative transfer system secretin trak | E5P00_24350 | Not Available | Positive | 4838170 - 4838898 | 25642.7 |
| type iv conjugative transfer system protein trae | E5P00_24355 | Not Available | Positive | 4838952 - 4839518 | 21255.6 |
| type-f conjugative transfer system secretin trak | E5P00_24360 | Not Available | Positive | 4839562 - 4840233 | 23484.0 |
| is3-like element is2 family transposase | E5P00_24365 | Not Available | Negative | 4840264 - 4841537 | 48156.1 |
| sel1 repeat family protein | E5P00_24370 | Not Available | Positive | 4841584 - 4841750 | 6460.69 |
| type iv secretion protein rhs | E5P00_24375 | Not Available | Positive | 4841971 - 4842090 | 4316.13 |
| type iv secretion protein rhs | E5P00_24380 | Not Available | Positive | 4842075 - 4842368 | 10737.6 |
| hypothetical protein | E5P00_24385 | Not Available | Positive | 4842457 - 4842798 | 12531.4 |
| type 1 fimbriae regulatory protein fime | E5P00_24395 | Not Available | Negative | 4844311 - 4844907 | 23117.6 |
| conjugal transfer protein trap | E5P00_24400 | Not Available | Negative | 4845209 - 4845425 | 8181.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





