Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E5P00_23695 | Not Available | Positive | 4751355 - 4751603 | 9223.03 |
| rhs element protein | E5P00_23700 | Not Available | Positive | 4751722 - 4753279 | 59826.0 |
| lyase | E5P00_23705 | Not Available | Positive | 4753300 - 4754142 | 31875.3 |
| type iv secretion protein rhs | E5P00_23715 | Not Available | Positive | 4754769 - 4755128 | 13251.8 |
| sel1 repeat family protein | E5P00_23720 | Not Available | Positive | 4755140 - 4755336 | 7583.26 |
| hypothetical protein | E5P00_23725 | Not Available | Positive | 4755372 - 4755758 | 14196.9 |
| cpbp family intramembrane metalloprotease | E5P00_23730 | Not Available | Positive | 4755948 - 4756601 | 24308.9 |
| antitoxin pemi | E5P00_23735 | Not Available | Positive | 4756694 - 4756951 | 9333.16 |
| mrna interferase pemk | E5P00_23740 | Not Available | Positive | 4756953 - 4757285 | 11881.5 |
| is6 family transposase | E5P00_23755 | Not Available | Negative | 4758596 - 4758670 | 2724.26 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





