Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class 1b ribonucleoside-diphosphate reductase subunit alpha | E5P00_23190 | Not Available | Positive | 4656207 - 4658351 | 80453.5 |
| ribonucleoside-diphosphate reductase 2 subunit beta | E5P00_23195 | Not Available | Positive | 4658361 - 4659320 | 36445.1 |
| glycine betaine/l-proline abc transporter atp-binding protein | E5P00_23200 | Not Available | Positive | 4659470 - 4659673 | 8026.56 |
| aromatic amino acid dmt transporter yddg | E5P00_23205 | Not Available | Negative | 4659799 - 4660680 | 31560.4 |
| sulfate abc transporter substrate-binding protein | E5P00_23210 | Not Available | Positive | 4660912 - 4661499 | 21465.8 |
| formate dehydrogenase-n subunit alpha | E5P00_23215 | Not Available | Positive | 4661548 - 4663959 | 89884.8 |
| formate dehydrogenase subunit beta | E5P00_23220 | Not Available | Positive | 4663972 - 4664856 | 32240.4 |
| formate dehydrogenase-n subunit gamma | E5P00_23225 | Not Available | Positive | 4664849 - 4665502 | 25370.0 |
| rhs repeat protein | E5P00_23230 | Not Available | Negative | 4665701 - 4668416 | 99805.7 |
| type vi secretion system tip protein vgrg | E5P00_23235 | Not Available | Negative | 4668483 - 4670591 | 78797.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





