Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system toxin hokd | E5P00_21925 | Not Available | Positive | 4446372 - 4446527 | 5737.24 |
| hypothetical protein | E5P00_21930 | Not Available | Positive | 4446744 - 4446995 | 9235.26 |
| hypothetical protein | E5P00_21935 | Not Available | Positive | 4447062 - 4447340 | 11140.2 |
| antitermination protein | E5P00_21945 | Not Available | Positive | 4448404 - 4449156 | 27927.8 |
| hypothetical protein | E5P00_21950 | Not Available | Negative | 4449434 - 4449523 | 3193.12 |
| cold shock-like protein cspf | E5P00_21955 | Not Available | Negative | 4449578 - 4449790 | 7563.18 |
| cold shock-like protein cspb | E5P00_21960 | Not Available | Positive | 4450091 - 4450306 | 7717.12 |
| phage lysis protein essd | E5P00_21965 | Not Available | Positive | 4451060 - 4451275 | 7741.44 |
| duf1327 domain-containing protein | E5P00_21970 | Not Available | Positive | 4451280 - 4451591 | 12091.3 |
| lysozyme | E5P00_21975 | Not Available | Positive | 4451588 - 4452121 | 19663.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





