Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yqae/pmp3 family membrane protein | E5P00_21875 | Not Available | Negative | 4441058 - 4441216 | 5865.57 |
| transcriptional regulator | E5P00_21880 | Not Available | Positive | 4441399 - 4441698 | 10596.9 |
| thiosulfate sulfurtransferase ygap | E5P00_21885 | Not Available | Positive | 4441708 - 4442232 | 18639.8 |
| dna-binding protein stpa | E5P00_21890 | Not Available | Negative | 4442279 - 4442683 | 15348.4 |
| is4 family transposase | E5P00_21895 | Not Available | Positive | 4442847 - 4442959 | 3985.84 |
| isncy family transposase | E5P00_21900 | Not Available | Positive | 4443134 - 4444447 | 50755.6 |
| protein flxa | E5P00_21905 | Not Available | Negative | 4444909 - 4445241 | 12208.4 |
| hypothetical protein | E5P00_21910 | Not Available | Negative | 4445444 - 4445749 | 11308.8 |
| type ii toxin-antitoxin system antitoxin relb | E5P00_21915 | Not Available | Positive | 4445774 - 4446013 | 9072.01 |
| type ii toxin-antitoxin system mrna interferase rele | E5P00_21920 | Not Available | Positive | 4446013 - 4446300 | 11225.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





