Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal abc transporter substrate-binding lipoprotein/fibrin-binding adhesin fima | E5P00_20940 | Not Available | Negative | 4256089 - 4256637 | 18112.2 |
| glutamate/aspartate:proton symporter gltp | E5P00_20945 | Not Available | Negative | 4257280 - 4258593 | 47107.0 |
| heme lyase nrfefg subunit nrfg | E5P00_20950 | Not Available | Negative | 4258935 - 4259531 | 22754.5 |
| heme lyase nrfefg subunit nrff | E5P00_20955 | Not Available | Negative | 4259528 - 4259911 | 14516.9 |
| heme lyase ccmf/nrfe family subunit | E5P00_20960 | Not Available | Negative | 4259904 - 4261622 | 63536.0 |
| cytochrome c nitrite reductase subunit nrfd | E5P00_20965 | Not Available | Negative | 4261642 - 4262598 | 35044.4 |
| cytochrome c nitrite reductase fe-s protein | E5P00_20970 | Not Available | Negative | 4262595 - 4263266 | 24568.8 |
| cytochrome c nitrite reductase pentaheme subunit | E5P00_20975 | Not Available | Negative | 4263263 - 4263829 | 20715.6 |
| ammonia-forming nitrite reductase cytochrome c552 subunit | E5P00_20980 | Not Available | Negative | 4263874 - 4265310 | 53705.7 |
| acetate--coa ligase | E5P00_20985 | Not Available | Positive | 4265703 - 4267661 | 72097.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





