Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cu(+)/ag(+) sensor histidine kinase cuss | E5P00_20265 | Not Available | Negative | 4128834 - 4130282 | 54098.6 |
| copper response regulator transcription factor cusr | E5P00_20270 | Not Available | Negative | 4130272 - 4130955 | 25396.1 |
| cu(+)/ag(+) efflux rnd transporter outer membrane channel cusc | E5P00_20275 | Not Available | Positive | 4131112 - 4132485 | 50272.4 |
| cu(+)/ag(+) efflux rnd transporter periplasmic metallochaperone cusf | E5P00_20280 | Not Available | Positive | 4132643 - 4132975 | 12251.9 |
| cu(+)/ag(+) efflux rnd transporter periplasmic adaptor subunit cusb | E5P00_20285 | Not Available | Positive | 4132991 - 4134214 | 44307.4 |
| cu(+)/ag(+) efflux rnd transporter permease subunit cusa | E5P00_20290 | Not Available | Positive | 4134226 - 4137369 | 114714.0 |
| aromatic amino acid transporter arop | E5P00_20295 | Not Available | Positive | 4137471 - 4138847 | 50648.3 |
| mechanosensitive ion channel family protein | E5P00_20300 | Not Available | Negative | 4138915 - 4140162 | 46605.5 |
| oxygen-insensitive nad(p)h nitroreductase | E5P00_20305 | Not Available | Negative | 4140270 - 4140923 | 23878.4 |
| mmcq/yjbr family dna-binding protein | E5P00_20310 | Not Available | Negative | 4141017 - 4141385 | 14051.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





