Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formyl-coa--oxalate coa-transferase | E5P00_19650 | Not Available | Positive | 3991106 - 3992356 | 45830.7 |
| oxalyl-coa decarboxylase | E5P00_19655 | Not Available | Positive | 3992410 - 3994104 | 60614.9 |
| transporter yfdv | E5P00_19660 | Not Available | Positive | 3994174 - 3995118 | 33617.9 |
| acetyl-coa--oxalate coa-transferase | E5P00_19665 | Not Available | Positive | 3995192 - 3996337 | 41673.2 |
| acid-sensing system histidine kinase evgs | E5P00_19670 | Not Available | Negative | 3996393 - 3999986 | 134811.0 |
| acid-sensing system dna-binding response regulator evga | E5P00_19675 | Not Available | Negative | 3999991 - 4000605 | 22619.5 |
| multidrug efflux mfs transporter periplasmic adaptor subunit emrk | E5P00_19680 | Not Available | Positive | 4001021 - 4002184 | 42587.9 |
| multidrug efflux mfs transporter permease subunit emry | E5P00_19685 | Not Available | Positive | 4002184 - 4003722 | 55994.4 |
| d-serine ammonia-lyase | E5P00_19690 | Not Available | Negative | 4003830 - 4005158 | 47873.3 |
| is4 family transposase | E5P00_19700 | Not Available | Negative | 4006067 - 4006176 | 3856.72 |
Pathways
933 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





