Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transaldolase | E5P00_19600 | Not Available | Negative | 3979701 - 3980654 | 35251.2 |
| sodium:alanine symporter family protein | E5P00_19605 | Not Available | Positive | 3980933 - 3982363 | 51621.9 |
| peroxide stress protein yaaa | E5P00_19610 | Not Available | Positive | 3982433 - 3983209 | 29601.5 |
| duf2502 domain-containing protein | E5P00_19615 | Not Available | Negative | 3983362 - 3983658 | 11379.5 |
| threonine synthase | E5P00_19620 | Not Available | Negative | 3983872 - 3985158 | 47086.4 |
| homoserine kinase | E5P00_19625 | Not Available | Negative | 3985159 - 3986091 | 33623.6 |
| bifunctional aspartate kinase/homoserine dehydrogenase i | E5P00_19630 | Not Available | Negative | 3986093 - 3988555 | 89127.5 |
| thr operon leader peptide | E5P00_19635 | Not Available | Negative | 3988637 - 3988702 | 2138.61 |
| trna/rrna methyltransferase | E5P00_19640 | Not Available | Negative | 3988916 - 3989602 | 25360.7 |
| yfdx family protein | E5P00_19645 | Not Available | Positive | 3989958 - 3990593 | 22978.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





