Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pqq-dependent sugar dehydrogenase | E5P00_19345 | Not Available | Positive | 3927859 - 3928974 | 41101.8 |
| glutathione s-transferase family protein | E5P00_19350 | Not Available | Negative | 3928971 - 3929597 | 23742.5 |
| serine-type d-ala-d-ala carboxypeptidase | E5P00_19355 | Not Available | Positive | 3929844 - 3931046 | 43611.3 |
| dna-binding transcriptional repressor deor | E5P00_19360 | Not Available | Negative | 3931093 - 3931851 | 28549.5 |
| undecaprenyl-diphosphate phosphatase | E5P00_19365 | Not Available | Negative | 3931909 - 3932505 | 22399.9 |
| multidrug efflux mfs transporter mdfa | E5P00_19370 | Not Available | Positive | 3932790 - 3934022 | 44323.7 |
| hypothetical protein | E5P00_19375 | Not Available | Negative | 3934063 - 3934347 | 10005.2 |
| 5-amino-6-(5-phospho-d-ribitylamino)uracil phosphatase | E5P00_19380 | Not Available | Negative | 3934433 - 3935248 | 30224.9 |
| mfs transporter | E5P00_19385 | Not Available | Negative | 3935248 - 3936456 | 41855.1 |
| tetr/acrr family transcriptional regulator | E5P00_19390 | Not Available | Positive | 3936540 - 3937076 | 20308.6 |
Pathways
931 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





