Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | E5P00_19035 | Not Available | Negative | 3866927 - 3867388 | 17420.7 |
| ribonuclease bn | E5P00_19040 | Not Available | Positive | 3867453 - 3868370 | 32931.5 |
| hypothetical protein | E5P00_19050 | Not Available | Positive | 3869678 - 3869747 | 2284.72 |
| citrate (si)-synthase | E5P00_19055 | Not Available | Negative | 3870049 - 3871332 | 48017.7 |
| hypothetical protein | E5P00_19060 | Not Available | Negative | 3871538 - 3871645 | 3827.66 |
| succinate dehydrogenase cytochrome b556 subunit | E5P00_19065 | Not Available | Positive | 3872041 - 3872430 | 14300.0 |
| succinate dehydrogenase membrane anchor subunit | E5P00_19070 | Not Available | Positive | 3872424 - 3872771 | 12898.4 |
| succinate dehydrogenase flavoprotein subunit | E5P00_19075 | Not Available | Positive | 3872771 - 3874537 | 64425.6 |
| succinate dehydrogenase iron-sulfur subunit | E5P00_19080 | Not Available | Positive | 3874553 - 3875269 | 26785.4 |
| 2-oxoglutarate dehydrogenase e1 component | E5P00_19085 | Not Available | Positive | 3875470 - 3878271 | 105068.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





