Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma-glutamyl-gamma-aminobutyrate hydrolase | E5P00_18520 | Not Available | Positive | 3767949 - 3768713 | 28014.7 |
| hth-type transcriptional regulator puur | E5P00_18525 | Not Available | Positive | 3768740 - 3769297 | 20092.8 |
| aldehyde dehydrogenase puuc | E5P00_18530 | Not Available | Positive | 3769572 - 3771059 | 53421.6 |
| gamma-glutamylputrescine oxidoreductase | E5P00_18535 | Not Available | Positive | 3771061 - 3772341 | 47172.3 |
| 4-aminobutyrate aminotransferase puue | E5P00_18540 | Not Available | Positive | 3772379 - 3773644 | 44731.7 |
| psp operon transcriptional activator pspf | E5P00_18545 | Not Available | Negative | 3773764 - 3774741 | 36988.7 |
| phage shock protein pspa | E5P00_18550 | Not Available | Positive | 3774908 - 3775576 | 25494.4 |
| envelope stress response membrane protein pspb | E5P00_18555 | Not Available | Positive | 3775630 - 3775854 | 8763.59 |
| envelope stress response membrane protein pspc | E5P00_18560 | Not Available | Positive | 3775854 - 3776213 | 13517.7 |
| phage shock protein pspd | E5P00_18565 | Not Available | Positive | 3776222 - 3776443 | 8042.22 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





