Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonucleoside-diphosphate reductase 1 subunit alpha | E5P00_18260 | Not Available | Positive | 3715771 - 3718056 | 85780.0 |
| ribonucleoside-diphosphate reductase 1 subunit beta | E5P00_18265 | Not Available | Positive | 3718290 - 3719420 | 43519.6 |
| ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein yfae | E5P00_18270 | Not Available | Positive | 3719420 - 3719674 | 9293.29 |
| lipopolysaccharide kinase inaa | E5P00_18275 | Not Available | Negative | 3719728 - 3720378 | 25297.4 |
| glycerophosphodiester phosphodiesterase | E5P00_18285 | Not Available | Negative | 3720841 - 3721917 | 40873.6 |
| glycerol-3-phosphate transporter | E5P00_18290 | Not Available | Negative | 3721922 - 3723280 | 50313.2 |
| anaerobic glycerol-3-phosphate dehydrogenase subunit a | E5P00_18295 | Not Available | Positive | 3723553 - 3725181 | 58961.7 |
| glycerol-3-phosphate dehydrogenase subunit glpb | E5P00_18300 | Not Available | Positive | 3725171 - 3726430 | 45359.9 |
| anaerobic glycerol-3-phosphate dehydrogenase subunit c | E5P00_18305 | Not Available | Positive | 3726427 - 3727617 | 44110.4 |
| isncy family transposase | E5P00_18310 | Not Available | Positive | 3727810 - 3728709 | 34893.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





