Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-hydroxy-6-oxononadienedioate/2-hydroxy-6- oxononatrienedioate hydrolase | E5P00_18095 | Not Available | Negative | 3682643 - 3683509 | 31939.3 |
| 2,3-dihydroxyphenylpropionate/2, 3-dihydroxicinnamic acid 1,2-dioxygenase | E5P00_18100 | Not Available | Negative | 3683527 - 3684471 | 34198.0 |
| bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase | E5P00_18105 | Not Available | Negative | 3684473 - 3686137 | 62117.2 |
| dna-binding transcriptional activator mhpr | E5P00_18110 | Not Available | Positive | 3686214 - 3687161 | 35580.3 |
| laci family dna-binding transcriptional regulator | E5P00_18115 | Not Available | Positive | 3687238 - 3688320 | 38592.5 |
| beta-galactosidase | E5P00_18120 | Not Available | Positive | 3688443 - 3691517 | 116489.0 |
| lactose permease | E5P00_18125 | Not Available | Positive | 3691569 - 3692822 | 46505.9 |
| is1 family transposase | E5P00_18135 | Not Available | Positive | 3693201 - 3693271 | 2385.83 |
| galactosamine-6-phosphate isomerase | E5P00_18140 | Not Available | Negative | 3693427 - 3694182 | 27725.5 |
| n-acetylgalactosamine permease iid component | E5P00_18145 | Not Available | Negative | 3694183 - 3694974 | 29003.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





