Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK8128 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1199545 bp
Thymine Count
1207172 bp
Guanine Count
1243212 bp
Cytosine Count
1247816 bp
Genome Length
4897745 bp
Protein-coding Genes
4564 genes
Non-Coding Genes
221 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitroreductase nfsa | E5P00_17860 | Not Available | Positive | 3639292 - 3640014 | 26802.2 |
| 30s ribosomal protein s6--l-glutamate ligase | E5P00_17865 | Not Available | Positive | 3640075 - 3640977 | 32438.5 |
| ybjn domain-containing protein | E5P00_17870 | Not Available | Positive | 3641065 - 3641541 | 17667.1 |
| spermidine/putrescine abc transporter substrate-binding protein potf | E5P00_17875 | Not Available | Positive | 3641892 - 3643004 | 40827.7 |
| putrescine abc transporter atp-binding subunit potg | E5P00_17880 | Not Available | Positive | 3643099 - 3644232 | 41933.3 |
| putrescine abc transporter permease poth | E5P00_17885 | Not Available | Positive | 3644242 - 3645195 | 35531.7 |
| putrescine abc transporter permease poti | E5P00_17890 | Not Available | Positive | 3645192 - 3646037 | 30473.3 |
| duf2593 family protein | E5P00_17895 | Not Available | Positive | 3646097 - 3646585 | 18519.1 |
| 23s rrna (uracil(747)-c(5))-methyltransferase rlmc | E5P00_17900 | Not Available | Positive | 3646626 - 3647753 | 41898.1 |
| abc transporter arginine-binding protein 1 | E5P00_17905 | Not Available | Negative | 3647952 - 3648683 | 26830.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





